chr10_10

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

29.5

E-value:

0.009

From sequence:

486201

To sequence:

486059

Alignments:

                                       v    v  v         v v   v                                  NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[10]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UGG G  GG:GGG :GGGG G   CA  :A AAA       :  UG  C CCCC: CCC:CCC C CCC  U++CA   U
    chr10 486201 UGGGGG-GGGGGGGGGGGGCGGAACAGCAAUAAA*[70]*CUCUUGCUCGCCCCCUCCCUCCCUCUCCCCCUCUCAUCGU 486059
                 ***776.555566666667777666665555555...9..45556666666677777777777777999999******** PP

>>

RNAfold
>chr10_10
CGAUGAGAGGGGGAGAGGGAGGGAGGGGGCGAGCAAGAGUGACUUAAGCA
CACACACACACACACACGCACACACACGUGAAUGUCUCCAUUAACUCAAC
CACAGUGAUUUUAUUGCUGUUCCGCCCCCCCCCCCCCCCCCA
........(((((.(.(((.(((.(((((((.((..(((...)))..))..........(((..((((........))))..)))................((((((((...))))))))..))))))))))))))))))). (-50.90)

Length sequence

: 142

Length match:

141