chr10_14

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

35.9

E-value:

0.0059

From sequence:

143494

To sequence:

143327

Alignments:

                         v         v       v v v         v v v       v       v           NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<~~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuG*[ 13]*CaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G GGG:G G:G GUGUG GUG::UG G G G       C C C CA::CAC CACCC:C C:CCC C:C 
    chr10 143494 UGUGGGUGUGCGGGUGUGUGUGUGUGGGGGGG*[104]*CACACACACACACCCACCCGCCCACCCGCACA 143327
                 *************************9998766....*..66778899999999999*************** PP

>>

RNAfold
>chr10_14
GUGCGGGUGGGCGGGUGGGUGUGUGUGUGUGUGUGUGUGUUCCGUCCUGA
CCAGAAAACAAAAAAAGGCACGUCAAUGAAAAGUGCGCCGUUAACUCACC
GCAUCACCUGGCAGGGGCCUCCCCCCCCCCCCCCCCCCCCCCACACACAC
ACACCCGCACACCCACA
.(((......))).(((((((((((.(((((((((((((...((((((.................))).)))..........(((((..(......)..))))).....((..((((......))))..))..........))))))))))))).))))))))))). (-64.20)

Length sequence

: 167

Length match:

166