chr10_2

cmsearch-Rfam

Family :

mir-150

Id:

RF00767

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00767

Description:

not description

Score:

31.7

E-value:

0.0044

From sequence:

161010

To sequence:

160923

Alignments:

                            v               v      v    v     v     v      v                  v            NC
                 :<<<<<<-<-<<<<<<<<<<<<---<<<<<<<<<<-<<<<_____>>>->->>>>>>>>>>--....>>>>>>>>>>>>->->>>>>>: CS
  RF00767      1 CuCCcCgaggCccuguCuCCCaACCCuuGUACCAGuGcugugcCucagaCcCUGGUACagGuu....uGGGgGacaggGAcccGgGGaC 85    
                 C:C:CC: :GC C:::CUCCC:  CCU G: : : U ::  +  U ::A C : : :C GG      :GGGGG:::G G : :GG:G:C
    chr10 161010 CUCUCCUGUGCGCCCCCUCCCCUUCCUCGCGUGUAUUGCCGAA-UAGCAGCAACAUGCAGGAGgaaaGGGGGGGGGGAGUGGAGGAGGC 160923
                 ***************************9998887655443333.33444455678888888877789********************** PP

>>

RNAfold
>chr10_2
CCUCCUCCACUCCCCCCCCCCUUUCCUCCUGCAUGUUGCUGCUAUUCGGC
AAUACACGCGAGGAAGGGGAGGGGGCGCACAGGAGAG
.(((((...(.(((((.((((((.((((.((..((((((((.....))))))))..)).)))))))))).))))).)...))))).. (-46.10)

Length sequence

: 87

Length match:

86