chr10_5

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

32.9

E-value:

0.0012

From sequence:

100067

To sequence:

99935

Alignments:

                                  v                                     v                             NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAg*[ 6]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 U GG:  GGGGGG::GG :::G:  :G:G GAAA:      :A+CC:C: :C::: CC::CCCCCCC :CC +   + + A A+
    chr10 100067 UGGGGGUGGGGGGGGGGGGAAGA--UGAGGGAAAG*[58]*UAACCUCA-UCUUUGCCCCCCCCCCCUUCCUUCACCAUGAGAC 99935 
                 **********************5..6777777775...*..67777776.5********************************* PP

>>

RNAfold
>chr10_5
UCUCAUGGUGAAGGAAGGGGGGGGGGGCAAAGAUGAGGUUACACUUGACU
CUCCUUCUUCUUUCCACGACUACAAGGCAGAGAGGAAGCAUCUCCUUCUC
UUUCCCUCAUCUUCCCCCCCCCCCCACCCCCA
......((((......(((((((((((..(((((((((........((.....((((((((((((..........)).))))))))))....))..........)))))))))))))))))))))))).... (-56.10)

Length sequence

: 132

Length match:

131