chr10_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.1

E-value:

0.0035

From sequence:

439591

To sequence:

439703

Alignments:

                            vvvv           vvv                 vvv          vvvv                       NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<_~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAgu*[ 5]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                   GG::+G:GG+G AGG:GG:G: ::   AG A :       :+GCCCC:::C:CC:CC    CC:C ::CC CU+UU+CA   +
    chr10 439591 AGGGGGGGAGGAGGAGGAGGAGGAGG---AGGAGGG*[41]*UUGCCCCCCCCUCCCCC----CCUCACUCCUCUUUUUCAGUUC 439703
                 ***********766666555555555...5555444...9..45577766666666666....********************** PP

>>

RNAfold
>chr10_7
GGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGGGUUUCGUGAGGGGCUUUU
GCCCACGUGUCUCGCUCUCUUACUUGCCCCCCCCUCCCCCCCUCACUCCU
CUUUUUCAGUUC
((((((((((((((((.((.(((((.((.(((((...(((((((((....)))).((.....))....)))))..)))))))))))).)))))).))))))))))))..... (-60.50)

Length sequence

: 112

Length match:

111