chr10_9

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

29.6

E-value:

0.0086

From sequence:

444562

To sequence:

444453

Alignments:

                            v                          v                       NC
                 :<<<<<-<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGG*[29]*CCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGG::AG:G  G::G:GGGGG      CCCCC:C::C  C:CC::CCCC  UUC +A  +
    chr10 444562 GGGGGGAGGGGAGGGGAGGGGG*[55]*CCCCCUCUCCCUCUCCCUCCCCGCUUCACACCC 444453
                 *********9999988888887...9..88888888888889999999999********** PP

>>

RNAfold
>chr10_9
GGUGUGAAGCGGGGAGGGAGAGGGAGAGGGGGGAUUGAAGGGGGAGAGAG
AAUAGGGCGGAUAGAUGCAGCCGUGCUGCGAGUCUCGCCCCCUCCCCUCC
CCUCCCCCC
...........(((.(((((.(((((.((((((......(((.((((.....(((.((((..........)))).)))....)))).)))))))))))))))))))))) (-56.40)

Length sequence

: 109

Length match:

108