chr11_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.3

E-value:

0.0058

From sequence:

258468

To sequence:

258574

Alignments:

                          v                                     v                     NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<~~~~~~>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcA*[22]*UggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GG ::+G: GGG :G::::G:C :A      U:G:C::::C: CCC :CC:: CC+ +UU+C+   +
    chr11 258468 GGGGGGGGGCGGGUGGGGAAGACGGA*[45]*UCGUCUUUUCCGCCCCUCCCUUCCUCUUUUCUUUUC 258574
                 ***********************999...9..99********************************** PP

>>

RNAfold
>chr11_7
GGGGGGGGCGGGUGGGGAAGACGGAGGAGUGCGCGGGGCCAAAGGACGAA
GAUGCGAUGGCGCAACGGGUUCGUCUUUUCCGCCCCUCCCUUCCUCUUUU
CUUUUC
((((((((.((((((((((((((((....(.((..(.((((..(.(......).)..)))).)..)).))))))))))))))))).))))))))............ (-50.80)

Length sequence

: 106

Length match:

105