chr11_9

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

35.8

E-value:

0.0064

From sequence:

234742

To sequence:

234680

Alignments:

                    v         v                               v        v      NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGa*[23]*uCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :GC G  GUGUG  UGUGUGUG:::::      :::::CACACAC CACAC  C GC:CU
    chr11 234742 UGCGGGUGUGUGGGUGUGUGUGUGCUC*[ 9]*GAGCACACACACACACACGUCAGCGCU 234680
                 ************************975...*..579************************ PP

>>

RNAfold
>chr11_9
AGUGCCAGCGCUGACGUGUGUGUGUGUGUGCUCUGAUGUGUGGAGCACAC
ACACACCCACACACCCGCACACGCAC
.((((..(.((.(..(((((((((((((((((((.......)))))))))))))))..))))..).)).)..)))) (-38.60)

Length sequence

: 76

Length match:

61