chr12_2

cmsearch-Rfam

Family :

mir-150

Id:

RF00767

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00767

Description:

not description

Score:

37.2

E-value:

0.00015

From sequence:

335524

To sequence:

335597

Alignments:

                                                                                       NC
                 :<<<<<<-<-<<<<<<<<<<<<---<<<<<<<~~~~~~>>>>>>>-->>>>>>>>>>>>->->>>>>>: CS
  RF00767      1 CuCCcCgaggCccuguCuCCCaACCCuuGUAC*[22]*GUACagGuuuGGGgGacaggGAcccGgGGaC 85    
                 C:CCC:: : CCC:G:C:C C:AC C :::A:      :U::: G U:G G:G:C:GGG :C::GGG: 
    chr12 335524 CCCCCUUGUACCCAGCCUCACCAC-CACACAU*[12]*AUGUGUGGUGGUGAGGCUGGGUACAAGGGGG 335597
                 *********************997.7777775...5..5777778889********************* PP

>>

RNAfold
>chr12_2
GUGGCCCCCCUUGUACCCAGCCUCACCACCACACAUACGCCUACCUGCAU
GUGUGGUGGUGAGGCUGGGUACAAGGGGGGCCAGA
.(((((((((((((((((((((((((((((((((((..((......))))))))))))))))))))))))))))))))))))).. (-81.30)

Length sequence

: 85

Length match:

72