chr12_6

cmsearch-Rfam

Family :

mir-299

Id:

RF00756

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00756

Description:

not description

Score:

37.2

E-value:

1.1e-05

From sequence:

335531

To sequence:

335590

Alignments:

                                         v        v                         NC
                 <<<<<<<<<<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>> CS
  RF00756      1 AAGAaguGGuUuACCGUCCCACAuac*[11]*guaUGUGGGACGGUaAaCCgcuUCUU 63    
                 : :::::G :U:ACC::C CACAU C      G AUGUG G::GGU:A: C::::: :
    chr12 335531 GUACCCAGCCUCACCACCACACAUAC*[ 8]*GCAUGUGUGGUGGUGAGGCUGGGUAC 335590
                 ************************88...7..78************************ PP

>>

RNAfold
>chr12_6
UGUACCCAGCCUCACCACCACACAUACGCCUACCUGCAUGUGUGGUGGUG
AGGCUGGGUACAA
(((((((((((((((((((((((((..((......))))))))))))))))))))))))))). (-52.50)

Length sequence

: 63

Length match:

58