chr13_10

cmsearch-Rfam

Family :

mir-558

Id:

RF01021

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01021

Description:

not description

Score:

32.8

E-value:

0.00071

From sequence:

148082

To sequence:

148197

Alignments:

                                       v          v                v          v                NC
                 ::::::::<<-<<<-<<<<<<-<<<<<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>->>>->>:: CS
  RF01021      1 gUGUGUGUGcGcguguGuGguUauuuuGGuacaGcaGCu*[23]*aGCugCuguaCCaaaauacCaCaAacgGgCUG 94    
                 GUGUGUGUG:G:GUGUGUG :U U:U:: U::: ::G::      ::C:: :::A ::A:A : CACA AC: :C G
    chr13 148082 GUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUG*[46]*CACACCCACAUACACA-CGCACACACACACGG 148197
                 *******************99877777777777777764...9..5555555555555555.69************* PP

>>

RNAfold
>chr13_10
UGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCCAGCUAGUGCC
UCUUCUGUCUUGUCCACUGACACACCAAGGUCGACACACCCACAUACACA
CGCACACACACACGG
....((((((((((((((((((((((((.((((((..(((.((....))......((((.........))))......)))..)))))).)))))))))))))))))))))))). (-59.90)

Length sequence

: 115

Length match:

114