chr13_11

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

50.6

E-value:

3.3e-06

From sequence:

148079

To sequence:

148198

Alignments:

                              v            v                  v           v               NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUG*[11]*CaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 CG:G:G:GUGUG  UGUGUGU ::UG G:GUGUG      CAC:C CA:: ACACAC CACAC:C:C:CG U
    chr13 148079 CGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUG*[54]*CACACCCACAUACACACGCACACACACACGGU 148198
                 ************9999999999999999999987...*..******************************** PP

>>

RNAfold
>chr13_11
GUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCCAGCUAGU
GCCUCUUCUGUCUUGUCCACUGACACACCAAGGUCGACACACCCACAUAC
ACACGCACACACACACGGU
(((((((((((((((((((((((.(((((((((((((((.((.((.(((........))).)).)).)))..))))))........)))))).)))))))))))))))))))))))... (-63.30)

Length sequence

: 119

Length match:

118