chr13_12

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

40.9

E-value:

0.00047

From sequence:

148196

To sequence:

148087

Alignments:

                 v            v       v    v                   v    v      v           v   NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--~~~~~~->>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUG*[10]*CCaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                  G:G:G:GUGUG   GUGUGU ::UG G:GUGU        CAC:C CA:: ACACAC+CACAC:C:C:C C 
    chr13 148196 CGUGUGUGUGUGC--GUGUGUAUGUGGGUGUGU-*[46]*ACACACACACACACACACACACACACACACACA 148087
                 ************6..777777777777777774....9..599***************9************** PP

>>

RNAfold
>chr13_12
GUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCCAGCUAGUGCCUCUUC
UGUCUUGUCCACUGACACACCAAGGUCGACACACCCACAUACACACGCAC
ACACACACG
(((((((((((((((((((((((.((((((..(((.((....))......((((.........))))......)))..)))))).))))))))))))))))))))))). (-59.50)

Length sequence

: 109

Length match:

108