chr13_13

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

38.0

E-value:

0.002

From sequence:

351231

To sequence:

351336

Alignments:

                              v                               v               NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGa*[23]*uCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G:G:G GUGUG   GUGUGUGU:UG:      :CA:GCACACAC CACAC C:C:C: +
    chr13 351231 UGUGUGUGUGUGU--GUGUGUGUGUGU*[54]*ACACGCACACACGCACACGCACACAAC 351336
                 *********9994..555555555554...*..679*********9************** PP

>>

RNAfold
>chr13_13
GUGUGUGUGUGUGUGUGUGUGUGUUCCGAAGACAAAAAGAAGAAAUUAAA
GGGCUCAACAUUAUAAGAAAAUAGACGCACACGCACACACGCACACGCAC
ACAAC
(((((((((((((((((((((((((((.......................))).......................))))))))))))))))))))))))..... (-42.60)

Length sequence

: 105

Length match:

104