chr13_4

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.0

E-value:

0.0037

From sequence:

170930

To sequence:

170834

Alignments:

                           v              v          v             v                      NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgG*[18]*CcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGGC G:: G  :G:::GGG:U: :G      C: ::CCC:::C:  C ::CCGCCCC UG U+   AA+
    chr13 170930 GGGGGCCGGCAGGGGGGGAGGGUUGAUG*[31]*CACCACCCUUUCCUUCAGUCCGCCCCAUGCUUGGGAAC 170834
                 ************************9887...9..7889********************************** PP

>>

RNAfold
>chr13_4
UUCCCAAGCAUGGGGCGGACUGAAGGAAAGGGUGGUGGGGGCAGGGAAAG
CGGUGGUGUGCGGGUGUGCAUCAACCCUCCCCCCCUGCCGGCCCCC
.(((((....)))))..............((((((((((((..((((..(.((((((((((....))))))).)))))))))))))))).)))).. (-42.50)

Length sequence

: 96

Length match:

95