chr13_5

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

37.0

E-value:

0.0001

From sequence:

280301

To sequence:

280389

Alignments:

                                   v                       v                              NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgG*[18]*CcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  G G::+GGGGGG::GGG   GC : :G      C: :GC   CCC::CCCCCCC::C CCU+U+CC   A+
    chr13 280301 GGUGGUGGGGGGGGGGGGAGGGCAAGAG*[23]*CUUUGCUUCCCCCCCCCCCCCGUCGCCUUUCCCGUGAA 280389
                 ******9999999999999999988777...9..78889999999999999********************* PP

>>

RNAfold
>chr13_5
GUGGUGGGGGGGGGGGGAGGGCAAGAGUGCGCCAUACACUACACCGGCUC
CUUUGCUUCCCCCCCCCCCCCGUCGCCUUUCCCGUGAA
(((((((((((((((((.(((((.(((.(.(((............))).))))))))).)))))))))))))))))............ (-50.30)

Length sequence

: 88

Length match:

87