chr13_6

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

31.4

E-value:

0.0029

From sequence:

385452

To sequence:

385615

Alignments:

                                   v v                                 v v                              NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<__~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAgua*[ 4]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                   GGG +G:GGGG:AGG  G G: ::GGGAGA AG++      C+ CCCC:::C C  CCU:CCCC:C  CCC CU+ +CC+   +
    chr13 385452 AGGGGGGGGGGGGGAGG-CGAGAAGGGGGAGAGAGAG*[87]*CUUCCCCCCUCCC--CCUCCCCCUCGUCCCUCUUCCCCUGCUC 385615
                 ****************9.5799**********99975...*..899******9977..9*************************** PP

>>

RNAfold
>chr13_6
GGGGGGGGGGGGGAGGCGAGAAGGGGGAGAGAGAGAGGCGCGGCAAUCAC
CUAAGUCGCAGUCGUGAUUCGCACACACACACACACAUGGGCGAGUGAGU
CGGCGUGAAUGACGACGACGUCCUUCCCCCCUCCCCCUCCCCCUCGUCCC
UCUUCCCCUGCUC
.(((.(((((((((((.((..((((((((.(.(((.((.(((((..........))))).(((((.((((((.(..((.(((.(.(....).).))).))..).)))))).)))))...........)).))).).))))))))..))))))))))))).))) (-76.70)

Length sequence

: 163

Length match:

162