chr14_11

cmsearch-Rfam

Family :

mir-885

Id:

RF01015

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01015

Description:

not description

Score:

28.1

E-value:

0.0065

From sequence:

366581

To sequence:

366510

Alignments:

                                vvvv   vv                           vv  vvvv                  NC
                 <<<--<<<<<<<<<<<<<<<<-<<<<<<<<<<<__~~~~~~>>>>>>>>>->>>>>>>>>>>>>>>>>>-->>>:: CS
  RF01015      1 CcGcaCUCUuUCCacUAcgCcAccCUGCcUCUccu*[ 4]*gAGAgGCAGCgggGcgUAguGGAaAGAGCACgGGU 74    
                 CC:C CUCU:UC :C         C:GC:UCUC+       GAGA:GC:G GG  +G  G: GA:AGAG  :GGG 
    chr14 366581 CCCCCCUCUCUCUCC---------CCGCUUCUCAC*[13]*GAGAAGCGGGGG--UGGGGGGGAGAGAGAGGGGGG 366510
                 ************854.........55666665543...5..556666655444..4556778999999999***** PP

RNAfold
>chr14_11
CCCCCCUCUCUCUCCCCCCCACCCCCGCUUCUCACCAUCUGUGUCGGUGA
GAAGCGGGGAGAGAGAGGGGGGC
(((((((((((((((((.........((((((((((.........))))))))))))))))))))))))))). (-56.40)

Length sequence

: 73

Length match:

70