chr14_3

cmsearch-Rfam

Family :

mir-185

Id:

RF00771

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00771

Description:

not description

Score:

41.7

E-value:

8.3e-05

From sequence:

422450

To sequence:

422533

Alignments:

                         vv                                                               vv          NC
                 <<<<<-<<<<<<<<<<<<.-<<<<<<<<<<<<<<<-..-<<______>>->>>>>>>>>>>>>>>>>>>>>>>>>>>->>>>>: CS
  RF00771      1 GGGgguGagGGgcugGaG.AGaaaGcCaGucCCuGA..UGGUcCCcUCCCCaGGggCuGgCuuuCCuCcggcCCcuCccuCCCA 81    
                 GGG:G  A  G:C:G::: AGA:AG:CAG::C:::    ::UC  +U::C:::G::CUG:CU:UC:::C:G:C  U CC:CCC 
    chr14 422450 GGGAGAGACAGACAGAGAgAGACAGACAGAGCGCAGccAACUCUUUUGUCUGCGCUCUGUCUGUCUCUCUGUCCCUUCCUCCCG 422533
                 *****************978***************533688888888899********************************** PP

>>

RNAfold
>chr14_3
GGAGAGACAGACAGAGAGAGACAGACAGAGCGCAGCCAACUCUUUUGUCU
GCGCUCUGUCUGUCUCUCUGUCCCUUCCUCCCG
((((.((.((..(.(((((((((((((((((((((.(((.....))).))))))))))))))))))))).)..)))))))).. (-51.80)

Length sequence

: 83

Length match:

82