chr14_5

cmsearch-Rfam

Family :

mir-253

Id:

RF01064

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01064

Description:

not description

Score:

33.4

E-value:

0.00038

From sequence:

223805

To sequence:

223707

Alignments:

                   vv                             v          v                              vv   NC
                 ::<<<<<--<<<<<<<<<<<<<<<<<<<-<<<-<<<~~~~~~>>>>>>->->>>>>>>>>>>>>>>>>>--->>>>>:: CS
  RF01064      1 aUcguuCgagucgCcgccCuucuCaCaCACCucaCu*[27]*aGuaGGCGUuGuGggaaGggcgGcgacgauGaacgua 100   
                     ::C  ::C:CC::CC:UC:C:CAC C::C ::      :: ::G G UG:G:GA:GG::GG:G::GA G::  + 
    chr14 223805 GCCUCCCCUCCCCCCCUCCCUCCCUCACCCUCCCUC*[27]*GAAGAGAG-UGAGGGAGGGGGGGGGGGGAAGGGCACC 223707
                 ***************************988876443...6..33467777.**************************** PP

>>

RNAfold
>chr14_5
GGUGCCCUUCCCCCCCCCCCCUCCCUCACUCUCUUCCGACCUCGUCACUU
UCCCUCUUUAGGUGAGGGAGGGUGAGGGAGGGAGGGGGGGAGGGGAGGCG
..((((..(((((.(((((((((((((...............(.((((((((((((.......)))))))))))).)))))))))))))).))))))))) (-67.60)

Length sequence

: 100

Length match:

97