chr14_7

cmsearch-Rfam

Family :

mir-423

Id:

RF00870

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00870

Description:

not description

Score:

30.8

E-value:

0.0055

From sequence:

422533

To sequence:

422449

Alignments:

                 v        v                                                           v        v NC
                 <<<<<<<-<<<<<<<<<<<<--<<<-<<<<-<<<<<~~~~~~>>>>>>>>>->>>---.>>>>>>>>>>>>->>>>>>> CS
  RF00870      1 aGGaaGcUaggCugaGGGgCAGaGaGcGaGaCuuuu*[ 9]*aaaaGCuCgGuCugAG.GcCCCucaGucuugCuuCCu 81    
                  GG:AG  A G:::AG:G::A AGA :GAG C::::      ::::GCUC:GUCUG   ::C:CU:::U U  CU:CC 
    chr14 422533 CGGGAGGAAGGGACAGAGAGACAGACAGAG-CGCAG*[13]*CUGCGCUCUGUCUGUCuCUCUCUGUCUGUCUCUCCCU 422449
                 ******************************.99987...8..78999*********999******************** PP

RNAfold
>chr14_7
GGGAGAGACAGACAGAGAGAGACAGACAGAGCGCAGCCAACUCUUUUGUC
UGCGCUCUGUCUGUCUCUCUGUCCCUUCCUCCCG
(((((.((.((..(.(((((((((((((((((((((.(((.....))).))))))))))))))))))))).)..))))))))). (-56.00)

Length sequence

: 84

Length match:

83