chr15_3

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

32.1

E-value:

0.002

From sequence:

535822

To sequence:

535945

Alignments:

                   v                                                                   v              NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAg*[ 6]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UG G::+G:GGG ::G:::G:G: : :GGAG   G      C+ CCC: ::C:C:::C:: CCC:C ::C C+        A U
    chr15 535822 UGUGGGGGGGGGGGGGGAAGAGGAGGAGGAGGGGG*[53]*CUUCCCUUCCCUCUCUCUCUCCCUCUCUCUCU-------GACU 535945
                 *******************************8655...*..666**************************995.......6789 PP

>>

RNAfold
>chr15_3
GUGGGGGGGGGGGGGGAAGAGGAGGAGGAGGGGGGCGUGUGAUGUCCACU
GCAGCUGAUGGAGCAGCAGUGCUGGUGCCAUCGCGCUCUUCCCUUCCCUC
UCUCUCUCCCUCUCUCUCUGACU
((.(((((((((((((.((((((((.(((((((((.((((((((.(((((((.(((.....))).)))))).....).)))))))).))))))))))))).)))).))))))))))))).)). (-76.40)

Length sequence

: 123

Length match:

122