chr15_6

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

38.6

E-value:

0.0015

From sequence:

422578

To sequence:

422725

Alignments:

                 v v   v      v                                           v     v   v v   NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUG*[11]*CaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                  G G:G  UGUGA  GUGUGUG::UG G:GUG G      CAC:C CA::CACACAC CACA  C:C C C 
    chr15 422578 GGCGUGGGUGUGAGGGUGUGUGUGUGUGUGUGAG*[82]*CACACGCACACACACACACACAUACACACGCA 422725
                 ********************************87...*..8888888888888888888888888888889* PP

>>

RNAfold
>chr15_6
GCGUGGGUGUGAGGGUGUGUGUGUGUGUGUGAGGGAGGGGAGGGAGGGAA
AGGCUACAAAGUCGAUCGUUUUGUAUGUUAGUUAGGUAGUUGCUCUAGUG
GAGAAGACACGCAGACACACGCACACACACACACACAUACACACGCA
(((((.(((((...(((((((((((((((((.........(.((((.((..((((....))))..)).)))).).((((.((...((.(((.((((...))))..))))))).))))))))))))))))))))).))))).))))). (-56.50)

Length sequence

: 147

Length match:

146