chr15_7

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

41.5

E-value:

0.00035

From sequence:

422725

To sequence:

422578

Alignments:

                   v v    vv               v                 v             vv    v v     NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<-~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGU*[12]*CaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G G G:GU  G GUGUGUGUG::UG G:GUGU      CAC:C CA::CACACACCC  AC:C C C:C+
    chr15 422725 UGCGUGUGUAUGUGUGUGUGUGUGUGCGUGUGU*[83]*CACACACACACACACACCCUCACACCCACGCC 422578
                 ********************************8...*..******************************** PP

>>

RNAfold
>chr15_7
GCGUGGGUGUGAGGGUGUGUGUGUGUGUGUGAGGGAGGGGAGGGAGGGAA
AGGCUACAAAGUCGAUCGUUUUGUAUGUUAGUUAGGUAGUUGCUCUAGUG
GAGAAGACACGCAGACACACGCACACACACACACACAUACACACGCA
(((((.(((((...(((((((((((((((((.........(.((((.((..((((....))))..)).)))).).((((.((...((.(((.((((...))))..))))))).))))))))))))))))))))).))))).))))). (-56.50)

Length sequence

: 147

Length match:

146