chr16_4

cmsearch-Rfam

Family :

mir-3017

Id:

RF02025

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF02025

Description:

not description

Score:

35.5

E-value:

0.00076

From sequence:

86173

To sequence:

86228

Alignments:

                                                                           NC
                ::::::::::<<<<<<<<<<<<<<-~~~~~~->>>>>>>>>>>>>>:::::::::::: CS
  RF02025     1 cGCGUCGGUGcCGUGuUCuGUGaCU*[33]*uGuCACaGAaCACGgGACCGGCCGCAu 85   
                   GUCGGUG:CGUGU:C:GU::CU      UG::AC:G:ACACG: AC GGCC C  
    chr16 86173 AAGGUCGGUGGCGUGUGCAGUCGCU*[ 4]*UGCGACUGCACACGCCACUGGCCUCUC 86228
                ************************9...*..6************************** PP

RNAfold
>chr16_4
GCAGGUGUUGGGUGAAGGUCGGUGGCGUGUGCAGUCGCUCCUCUGCGACU
GCACACGCCACUGGCCUCUCUUUCGGUAUUGCAUC
((((.(((((((.(((((((((((((((((((((((((......))))))))))))))))))))))).)).)))))))))))... (-56.40)

Length sequence

: 85

Length match:

54