chr16_5

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

34.8

E-value:

0.0004

From sequence:

174294

To sequence:

174381

Alignments:

                    v                              v          v                            v               NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<_____~~~~~>-->>>>>>>>>>.>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAguaUuU*[1]*cagCcCcUggCCC.cccCugCCCccCCgccCCcugUuccaaaau 84    
                 UG  G:A:GG:GG::G:GG:G::U::G G G AAG +U+       A CC C::::C: CC:C::CC:CC: :C  CCU+U+C++   +
    chr16 174294 UGGAGUAAGGAGGAGGAGGAGAGUGCGUGGGGAAGCGUAC*[5]*-ACCCACGUCUCUuCCUCCUCCUCCUUACAUCCUUUCCUUUGGC 174381
                 *****************************99999766655..4...459********7357**************************** PP

>>

RNAfold
>chr16_5
GGAGUAAGGAGGAGGAGGAGAGUGCGUGGGGAAGCGUACCCUUGACCCAC
GUCUCUUCCUCCUCCUCCUUACAUCCUUUCCUUUGGC
((((((((((((((((((((((.(((((((.(((......)))..)))))))))).)))))))))))))))).)))........... (-52.90)

Length sequence

: 87

Length match:

86