chr17_10

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

34.6

E-value:

0.00043

From sequence:

583154

To sequence:

583062

Alignments:

                                                                                  NC
                 :<<<<<-<<<<<<<<<<<<<<<<-~~~~~~>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcU*[26]*gCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 U GG::+G::GG  :GGGG:GG:U      :CC:CCCC:  CC::CC::CC +  UUCC+   +
    chr17 583154 UGGGGGGGGGGGGGGGGGGAGGGU*[35]*CCCUCCCCUUUCCUUCCCUCCUUCCUUCCUUCGC 583062
                 **********************97...9..9********************************* PP

>>

RNAfold
>chr17_10
CGAAGGAAGGAAGGAGGGAAGGAAAGGGGAGGGGGAGGCCCAUAUACAUG
UGUCGUGUAUGCACACAUACCCUCCCCCCCCCCCCCCCCCCA
............((.(((..((...((((.((((((((...........((((.((((....))))))))))))))))))))))..))))). (-39.00)

Length sequence

: 92

Length match:

91