chr17_13

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

35.3

E-value:

0.0082

From sequence:

152583

To sequence:

152720

Alignments:

                            v            v        v          v              NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguG*[25]*CaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G:G:G:GUGU  GUGUGUG:G:: G      C ::C:CACACC ACAC:C:C:C:CU
    chr17 152583 UGUGUGUGUGUGUGUGUGUGCGUGUG*[86]*CCCACGCACACCAACACACACACACU 152720
                 **********************9966...*..457899******************** PP

>>

RNAfold
>chr17_13
GUGUGUGUGUGUGUGUGUGCGUGUGGGGGAAGGGGUGCCUCGGGGGGUCA
UCUGUUUGAGCAGGAAGAGAAGCGCAAUCAUCGGUGCACAACCUGAGCGC
ACUUCUGCAAACCCACGCACACCAACACACACACACU
((((((((((((..(((((((((.((....((((((((((((((..((((((((.(((.((..........)).))).))..)))).))..)))))).)))))))).....)))))))))))..)))))))))))). (-74.10)

Length sequence

: 137

Length match:

136