chr17_2

cmsearch-Rfam

Family :

mir-1224

Id:

RF00942

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00942

Description:

not description

Score:

32.3

E-value:

0.0037

From sequence:

398870

To sequence:

399039

Alignments:

                                                                                         NC
                 :<<<<<<----<<<<<<<<<<<<-----------~~~~~~~------>>>>>>>>>>>>----.>>>>>>: CS
  RF00942      1 GuGaGGaCUcGGGaGGuGGaGGGUgGcgucgccA*[ 23]*GcuUCuCCCcCCaCCuCCUCUC.uCCuCaG 86    
                 G:GAGG:   GGG: G:GG:GGG GG++UCG+CA       GCU CUCCC:CC:C :CCUCUC :CCUC: 
    chr17 398870 GGGAGGGGGGGGGGGGGGGGGGGGGGUAUCGUCA*[106]*GCUCCUCCCCCCCCUCCCUCUCuCCCUCCC 399039
                 *******99999999999************9999....9..57889999999999999999997899**** PP

>>

RNAfold
>chr17_2
GGAGGGGGGGGGGGGGGGGGGGGGGUAUCGUCAUACAUGCACAAGUAAUA
UGUGCCUGCGCAUUGAGCUCAGUGGACGGAGAGCACACUCAAGUUCAUCU
CGGCUGCCCUCCGGACUGUCACAGAUACAGUUGCGUGGUGCUCCUCCCCC
CCCUCCCUCUCUCCCUCCC
(((((((((((((((((((((((((..(((((...((.(((((.......))))).))..(((((....)))))))))).((((((((.(((.(..((((.(((.(((....)).).)))..))))..).))).)).))))))))))))))))))))))))))))))). (-90.60)

Length sequence

: 169

Length match:

168