chr17_7

cmsearch-Rfam

Family :

mir-253

Id:

RF01064

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01064

Description:

not description

Score:

29.5

E-value:

0.0046

From sequence:

176305

To sequence:

176377

Alignments:

                                           v               v                            NC
                 ::<<<<<--<<<<<<<<<<<<<<<<<<<-<<~~~~~~>>->->>>>>>>>>>>>>>>>>>--->>>>>:: CS
  RF01064      1 aUcguuCgagucgCcgccCuucuCaCaCACC*[36]*GGCGUuGuGggaaGggcgGcgacgauGaacgua 100   
                  U: U::   :C:C:::CCU:C:C:C CAC:      :G G  G:G:G:AGG:::G:G: GA ::A : A
    chr17 176305 CUUUUCGCUUCCCCUCUCCUCCUCGCGCACG*[10]*CGUG-GGCGAGGAGGAGAGGGGGGAGCGAGAGA 176377
                 **************************88876...8..5777.6*************************** PP

>>

RNAfold
>chr17_7
CUCUUCGCCCCACCUUUUCGCUUCCCCUCUCCUCCUCGCGCACGUCAGUA
UGUCCGUGGGCGAGGAGGAGAGGGGGGAGCGAGAGACCGUCACGAGAGCG
((((.((.......(((((((((((((((((((((((((.((((.((...))..)))).)))))))))))).))))))))))))).......)))))).. (-60.50)

Length sequence

: 100

Length match:

71