chr17_8

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

36.1

E-value:

0.00018

From sequence:

398868

To sequence:

399052

Alignments:

                                                                                           NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<~~~~~~~>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgG*[ 18]*CcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 U:GGG:+GG:G G :GG:GGGG: ::G         C:::CCCC:CC: C C:CCC:CCC:C  U+CC+   +
    chr17 398868 UAGGGAGGGGGGGGGGGGGGGGGGGGGG*[119]*UCCCCCCCCUCCCUCUCUCCCUCCCUCCCUCCCUCUUC 399052
                 ******9999999999998888866664....*..57777888888888999********************* PP

>>

RNAfold
>chr17_8
AGGGAGGGGGGGGGGGGGGGGGGGGGGUAUCGUCAUACAUGCACAAGUAA
UAUGUGCCUGCGCAUUGAGCUCAGUGGACGGAGAGCACACUCAAGUUCAU
CUCGGCUGCCCUCCGGACUGUCACAGAUACAGUUGCGUGGUGCUCCUCCC
CCCCCUCCCUCUCUCCCUCCCUCCCUCCCUCUUC
(((((((((((((((((((((((((((..........((.(((((.......))))).))..(((((....)))))...(((((((((((.(((.(..((((.(((.(((....)).).)))..))))..).))).)).))))).)))))))))))))))))))))))))))))))........ (-95.70)

Length sequence

: 184

Length match:

183