chr17_9

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

36.0

E-value:

0.00019

From sequence:

440775

To sequence:

440860

Alignments:

                      v                                                             v                 NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<~~~~~>-->>>>>>>>>>>.>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAg*[6]*cagCcCcUggCCCc.ccCugCCCccCCgccCCcugUuccaaaau 84    
                   GGG A :::GG :G:G:GGG: :::G: G AA:     : +C:C::::CCC: C:C: CC::: C CCC +UGUU+C+   +
    chr17 440775 AGGGGGAGGGAGGGGGGGGGGGAAAGAGC-GCAAG*[8]*UGACGCUCUUCCCUcCUCCUCCUUUUCGCCCUUUGUUUCUCUUC 440860
                 *************9999998888877777.43332..4..66677777777776267999************************ PP

>>

RNAfold
>chr17_9
GGGGGAGGGAGGGGGGGGGGGAAAGAGCGCAAGAAGAAAAGUGACGCUCU
UCCCUCCUCCUCCUUUUCGCCCUUUGUUUCUCUUC
((((..(((((((((((((((.(((((((((..........)).))))))).)))))))))))))))..))))............ (-44.30)

Length sequence

: 85

Length match:

84