chr18_12

cmsearch-Rfam

Family :

TB10Cs4H2

Id:

RF01862

Type:

Gene; snRNA; snoRNA; HACA-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF01862

Description:

not description

Score:

89.1

E-value:

5.2e-18

From sequence:

316139

To sequence:

316205

Alignments:

                                                                                     NC
                 :<<<<<<<------<<<<<<<<<_______________>>>>>>>>>------>>>>>>>::::::: CS
  RF01862      1 ACGcCuCUGUCUAACGccccGCgauGCuacUaUgUCgucGCggggCGAUUUCAGGaGgCGGAGAUga 67    
                 ACG:CUCUGUCUAACG::::GCG UGCU+CU+UGUCG+CGC::::CGAUUUCAGGAG:CGGAGAUGA
    chr18 316139 ACGUCUCUGUCUAACGGGGUGCGGUGCUGCUCUGUCGGCGCACCUCGAUUUCAGGAGACGGAGAUGA 316205
                 ******************************************************************* PP

RNAfold
>chr18_12
CGUCUCUGUCUAACGGGGUGCGGUGCUGCUCUGUCGGCGCACCUCGAUUU
CAGGAGACGGAGAUGA
(((((((((((..(((((((((.(((......).)).)))))))))........))))))))))). (-34.70)

Length sequence

: 66

Length match:

65