chr18_5

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

29.6

E-value:

0.0086

From sequence:

295601

To sequence:

295513

Alignments:

                           v                               v                      NC
                 :<<<<<-<<<<<<<<<<<<<<<<-~~~~~~>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcU*[26]*gCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGG A :: GG :G:GGGGG:       :CCCCC:C: CC :: C CCCC+      A AA 
    chr18 295601 CGGGGGACGGCGGGGGGGGGGGGG*[31]*CCCCCCUCCUCCCUUGCUCCCCUACAGAAACAAG 295513
                 ******999866666666666663...7..9********************************* PP

>>

RNAfold
>chr18_5
UUGUUUCUGUAGGGGAGCAAGGGAGGAGGGGGGUAUGGAGCCUAAAAAGC
CCACAAUUUAUGCCCCCCCCCCCCCCCGCCGUCCCCCG
...........(((((((..(((.((.((((((((((((.................)))))))))))).)).)))..))..))))).. (-39.70)

Length sequence

: 88

Length match:

87