chr18_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

34.8

E-value:

0.00039

From sequence:

632733

To sequence:

632671

Alignments:

                           v           v           v           v                      NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<~~~~~~>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcA*[22]*UggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UG:GG:AGGG GG :G:::GGG U::      :: CCC:::C: CC CCC :CC:CC   ++C+   +
    chr18 632733 UGAGGGAGGGAGGGGGGAGGGGCUGG*[ 1]*CCACCCUCUCCUCCGCCCUCCCUCCCCCCUCUUGCC 632671
                 **********************8875...*..578********************************* PP

>>

RNAfold
>chr18_7
GACUGCACACGGCAAGAGGGGGGAGGGAGGGCGGAGGAGAGGGUGGGCCA
GCCCCUCCCCCCUCCCUCCCUCACGUAGGGGCGC
.........((.(....((((((((((((((.(((((.(..((....))..).))))).))))))))))))).).....).)). (-46.70)

Length sequence

: 84

Length match:

61