chr18_9

cmsearch-Rfam

Family :

mir-936

Id:

RF01002

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01002

Description:

not description

Score:

37.0

E-value:

4.9e-05

From sequence:

137090

To sequence:

136995

Alignments:

                         v                                                                          v         NC
                 ::::<<<<<--<<<<<<<<<<<<<<<<<.--<<-<<<---~~~~~~-->>>->>-->>>>->>>>>>>>------->>>>>-->>>>>:::: CS
  RF01002      1 uuaAGGccacUgGGgCagcaGagggagG.AaucaCaGaaa*[13]*aACuGAgagACcuuGcuuCugcuUUaCcAGGcCCcGCuggCCCaGA 98    
                   AAGG:: +U:GGG::G AGAGGGA:  A+::A: GA A      + C : ::   :UU CUUCU C: U  CAG:CCC:G  ::CC  G 
    chr18 137090 GGAAGGAUAUUGGGGAGGGAGAGGGAGGgAGAGAGGGAGA*[10]*CUCUCUCUUGUUUUUCUUCUUCCAUUUCAGUCCCUGACAUCCGCGU 136995
                 ***************************9866666666655...7..5699999999************************************ PP

RNAfold
>chr18_9
ACGCGGAUGUCAGGGACUGAAAUGGAAGAAGAAAAACAAGAGAGAGUCCA
CCCCUCUCUCCCUCUCUCCCUCCCUCUCCCUCCCCAAUAUCCUUCCA
....((((((..((((..((...(((.(.(((.......(((((((.......)))))))....))).).)))...))..))))..))))))..... (-26.20)

Length sequence

: 97

Length match:

94