chr19_11

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

32.4

E-value:

0.0016

From sequence:

515330

To sequence:

515251

Alignments:

                                          v                      v                                     NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<______>-->>>>>>>>>>>>>>>.>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAguaUuUacagCcCcUggCCCcccCu.gCCCccCCgccCCcugUuccaaaau 84    
                   GG::+G:GG::::G:GG GG: : G:  G A G      C+GC :C ::CC CC:C: :::CC:C ::CC C G  C++ A +
    chr19 515330 GGGGGAGGGGGAAAGGGGGGGGGCGUGAGGGGAUGG-----CUGCUUCCCCCCUCCUCCuUUUCCUCUUUCCUCAGCACUUCAUA 515251
                 ***********************9988888877763.....566666666666555555167899999***************** PP

>>

RNAfold
>chr19_11
AUAUGAAGUGCUGAGGAAAGAGGAAAAGGAGGAGGGGGGAAGCAGCCAUC
CCCUCACGCCCCCCCCCUUUCCCCCUCCCCCUC
............((((...((((....((.(((((((((..((..............))..))))))))).))))))..)))) (-28.90)

Length sequence

: 83

Length match:

78