chr19_12

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

33.8

E-value:

0.0007

From sequence:

564157

To sequence:

564267

Alignments:

                                     v v v v                v vv v                                NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~>>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[10]*CcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGG:A GGG G :GG:GG G   : GGAG  A      CCC :  C CC:CC: C CCC C:CCCC+U U++C+   +
    chr19 564157 AGGGGGAGGGGGGGGGGAGGUGCAAGAGGAGGGA*[37]*CCCCCCCCUCCUCCCUCUCCCUCCCCCCUUCUCUCCUCUC 564267
                 *******************************887...9..7777777889999999999999999999999999999*** PP

>>

RNAfold
>chr19_12
GGGGGAGGGGGGGGGGAGGUGCAAGAGGAGGGAGUUGGACGCGCCUUUGG
GAUGGGAAGUGAGGGUGUUCCCCCCCCCUCCUCCCUCUCCCUCCCCCCUU
CUCUCCUCUC
(((((((((((((((((((.(...((((((((.(..(((.(((((((((..........))))))))))))..).)))))))).))))))))))))))))))))...... (-66.70)

Length sequence

: 110

Length match:

109