chr19_6

cmsearch-Rfam

Family :

mir-197

Id:

RF00707

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00707

Description:

not description

Score:

33.6

E-value:

0.0062

From sequence:

564158

To sequence:

564261

Alignments:

                                    v   v        v      v         v   v                    NC
                 <<<<<<<<<<<<<<<<<<<<<--<<<<--<<<<~~~~~~>->>>-->>>>-->>>>>>>>>>>>>>>>>>>>> CS
  RF00707      1 gGccguGccGGGuaGaGagGGCAGuGgGAGGua*[ 8]*uCaCCcUuCaCCACCcuCuCuaCCCggCacggCc 75    
                 :G :::G::GGG :G:::: GCA :::GAGG:        C:CCC :::   C ::::C: CCC::C::: C:
    chr19 564158 GGGGGAGGGGGGGGGGAGGUGCAAGAGGAGGGA*[37]*CCCCCCCCUCCUCCCUCUCCCUCCCCCCUUCUCU 564261
                 **********************99999999997...9..466666666767788******************* PP

>>

RNAfold
>chr19_6
GGGGAGGGGGGGGGGAGGUGCAAGAGGAGGGAGUUGGACGCGCCUUUGGG
AUGGGAAGUGAGGGUGUUCCCCCCCCCUCCUCCCUCUCCCUCCCCCCUUC
UCU
((((((((((((((((((.(...((((((((.(..(((.(((((((((..........))))))))))))..).)))))))).))))))))))))))))))). (-65.20)

Length sequence

: 103

Length match:

102