chr19_9

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

39.1

E-value:

3e-05

From sequence:

288811

To sequence:

288650

Alignments:

                     v                 v                           v                 v                NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<~~~~~~>-->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAg*[ 6]*cagCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GG  : GG:GGG::G:::GGG  ::G::AG A :      :  C::C:: CCC:::C::CCC:CCC:  CCCU+ UCCA   U
    chr19 288811 AGGGGG-GGGGGGGGGGAGGGGAGGGGAAAGCAGA*[85]*UGCCUUCCCCCCCUCUCCCCCCUCCCCGUCCCUUCUCCACUGU 288650
                 ***744.5555555666666666688888887765...*..55699999*********************************** PP

>>

RNAfold
>chr19_9
CAGUGGAGAAGGGACGGGGAGGGGGGAGAGGGGGGGAAGGCACCCCUCUC
CGCCCUCGUUGUGUUCUGUCCCUUUUCCUUUCUUUGUGUGUAUGUGUAGA
GGUGACCCACCGUCCCGUCCGUUCACUUCUGCUUUCCCCUCCCCUCCCCC
CCCCCCCCCCU
....(((((((((((((((((((.((((((((((......).))))))))).))))).......)))))))))))))).................(((((((((((..((......))..).))))))))))............................. (-66.40)

Length sequence

: 161

Length match:

160