chr1_13

cmsearch-Rfam

Family :

mir-885

Id:

RF01015

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01015

Description:

not description

Score:

31.5

E-value:

0.00067

From sequence:

44902

To sequence:

44802

Alignments:

                                v                                        v                   NC
                <<<--<<<<<<<<<<<<<<<<-<<<<<<<<<<<__~~~~~~>>>>>>>>>->>>>>>>>>>>>>>>>>>-->>>:: CS
  RF01015     1 CcGcaCUCUuUCCacUAcgCcAccCUGCcUCUccu*[ 4]*gAGAgGCAGCgggGcgUAguGGAaAGAGCACgGGU 74   
                :C:+ CU : UCC::  ::CCA:CC: C::C:C+U      G:G::G :G G:GG::+ ::GGA : AG  :G:G 
     chr1 44902 UCCUUCUUCUUCCCUU-ACCCACCCCCCUCCCCAU*[32]*GGGGAGGGGGGUGGGUAGAGGGAGGGAGAGGGAGG 44802
                **************96.667778888888888866...9..88888888877777666679*************** PP

>>

RNAfold
>chr1_13
CUCCCUCUCCCUCCCUCUACCCACCCCCCUCCCCCUCUCUUGCGGCGCUG
GCGGAGAUCGAUGGAGAUGGGGAGGGGGGUGGGUAAGGGAAGAAGAAGGA
.(((.(((.(.(((((.(((((((((((((((((.(((((..((((.((...)).).)))..))))).)))))))))))))))))))))).).))).))) (-65.90)

Length sequence

: 100

Length match:

99