chr1_5

cmsearch-Rfam

Family :

mir-207

Id:

RF00802

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00802

Description:

not description

Score:

34.3

E-value:

0.0066

From sequence:

1152

To sequence:

1234

Alignments:

                                                              NC
               :<<<-<<<<<-<<<<<<--<<~~~~~~->>->>>>>>>>>>>>>>: CS
  RF00802    1 gagGcaGggGCGaGGgGCUGc*[39]*ggCUCcCCuCCccCuCcuU 79  
               G::G+:GGGG G:GG:GCUGC      GGC C:CC:CCCCC:C::U
     chr1 1152 GGGGUGGGGGAGGGGGGCUGC*[43]*GGCCCUCCCCCCCCCCUCU 1234
               ********************9...7..7****************** PP

>>

RNAfold
>chr1_5
GGGUGGGGGAGGGGGGCUGCUCAGCCUCUCCCCCCUCCCCUACACAGAGA
GUGCGGAGGGACUGGCCCUCCCCCCCCCCUCU
(((.(((((.(((((((....(((.((((((.(.((((........).))).).)))))).))))))))))))))))))... (-46.20)

Length sequence

: 82

Length match:

81