chr1_6

cmsearch-Rfam

Family :

mir-253

Id:

RF01064

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF01064

Description:

not description

Score:

30.8

E-value:

0.0021

From sequence:

202414

To sequence:

202320

Alignments:

                                                                                      NC
                 ::<<<<<--<<<<<<<<<<<<<<<<<<<-<~~~~~~>->->>>>>>>>>>>>>>>>>>--->>>>>:: CS
  RF01064      1 aUcguuCgagucgCcgccCuucuCaCaCAC*[38]*GCGUuGuGggaaGggcgGcgacgauGaacgua 100   
                  UC:U:C  :UC:C::C:C::C:CAC:  C      GC U:GUG:G::G:G::G:GA:G UG:A:G A
     chr1 202414 CUCCUCC--CUCCCUCCACCGCUCACUU-C*[36]*GCGUAGUGAGCGGUGGAGGGAGGGUGGAGGGA 202320
                 *******..*****************96.2...6..6789**************************** PP

>>

RNAfold
>chr1_6
UCUCCCUCCACCCUCCCUCCACCGCUCACUACGCGUGCCUGCGUGUCACC
AUAGAAUGACGAUGGACGGAGAAGUGAGCGGUGGAGGGAGGGAGGAGAGA
..((.((((.((((((((((((((((((((.(.(((.((....(((((........)))))..)))))..).)))))))))))))))))))).)))).)) (-62.90)

Length sequence

: 100

Length match:

93