chr1_7

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.8

E-value:

0.0042

From sequence:

136739

To sequence:

136667

Alignments:

                                 v            v                            NC
                 :<<<<<-<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggG*[33]*CcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GGGG:+G:GGGG:A: G:G      C:C :U:CCCC:C :CCCCC  U C +A A+
     chr1 136739 CGGGGGGGGGGGGGAAGGGG*[22]*CUCAUUCCCCCUCUCCCCCCCCUACACACAC 136667
                 ****************9999...9..9999*************************** PP

>>

RNAfold
>chr1_7
UGCGUGUGUGUGUAGGGGGGGGAGAGGGGGAAUGAGCCAUUUUCGUCGUC
AGCCUUCCCCCCUUCCCCCCCCCCCCCGCACACA
...(((((((.(..((((((((((.(((((((.(.((..............)))))))))).))))))))))..).))))))). (-48.70)

Length sequence

: 84

Length match:

71