chr21_12

cmsearch-Rfam

Family :

mir-671

Id:

RF00891

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00891

Description:

not description

Score:

29.1

E-value:

0.0094

From sequence:

379861

To sequence:

379923

Alignments:

                             vvvvvvv     vvv                       vvv   vvvvvvv             NC
                 :<<<<-<<-<<-<<<<<<<--<<<<<<<<<<<-<<<____>>>-->>>>>>>>>>>>>>>>>>->->>>->>>>: CS
  RF00891      1 GGaagAgGAGGAaGCCCuGGAgGggCuGGaGGUgauGGAUguuUUCCuCCgGuuCuCaGGGCuCCACCucuuuCG 75    
                  GAA:A:G GGA G +  +GA:GG   GG:GG G:UG A G:UU CC:CC+  UC:        C CC:+:UUC 
    chr21 379861 AGAAAAGGUGGAGGGAGGAGAAGG---GGGGGGGGUGAAAGCUUCCCCCCUCCUCU--------C-CCCUUUUCU 379923
                 **********88665554444444...44455588999999998766666444444........4.8999***** PP

RNAfold
>chr21_12
AGGAAAGAAAAGGUGGAGGGAGGAGAAGGGGGGGGGGUGAAAGCUUCCCC
CCUCCUCUCCCCUUUUCUCCAACU
.(((..(((((((.((((((.(.....(((((((((((....)))))))))))))))))))))))))))).... (-40.40)

Length sequence

: 74

Length match:

61