chr22_10

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

30.8

E-value:

0.0042

From sequence:

212924

To sequence:

213060

Alignments:

                   vv                      vv               vv                     vv              NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---~~~~~~->>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAA*[ 9]*gCcCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  G  G:  :GGGG::GGGGGG : :A  GAG AA      +CC  U:: CCCCCC::CCCC: C:CC C UG UCC+  AU
    chr22 212924 CG--GGUGAGGGGGGGGGGGGGGGAACAGAGCAA*[64]*ACCGUUUCUCCCCCCCCCCCCUUCCCCGCGUGCUCCUUCAU 213060
                 *8..555555555555555555555555666666...9..566555555555555555555555557899*********** PP

>>

RNAfold
>chr22_10
GGGUGAGGGGGGGGGGGGGGGAACAGAGCAACUACGCAUGGCAUGGAAGG
AAGGAAAAACAUGAAAUAUAACAUCUAGCGUCAUCACACACACGCACCGU
UUCUCCCCCCCCCCCCUUCCCCGCGUGCUCCUUCAU
(((.((((((((((((((((((((.(.((........(((((.((((.(......................).))))..))))).........)).).)))))))))))))))))))).))).............. (-58.30)

Length sequence

: 136

Length match:

135