chr22_11

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

35.8

E-value:

0.00022

From sequence:

213047

To sequence:

212914

Alignments:

                    v               v       v        v      v               v               NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGg*[16]*cCcUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                  GG G:AGGGGGG::GGGG G:: C G G      C C G::C CCCC::CCCCCCC:C CCC  UUC++    
    chr22 213047 CGGGGAAGGGGGGGGGGGGAGAAACGGUG*[66]*CUCUGUUCCCCCCCCCCCCCCCUCACCCGCUUCUUGUUG 212914
                 *************************9976...*..6699*********************************** PP

>>

RNAfold
>chr22_11
AACAAGAAGCGGGUGAGGGGGGGGGGGGGGGAACAGAGCAACUACGCAUG
GCAUGGAAGGAAGGAAAAACAUGAAAUAUAACAUCUAGCGUCAUCACACA
CACGCACCGUUUCUCCCCCCCCCCCCUUCCCCG
.........((((.((((((((((((((((((((.(.((........(((((.((((.(......................).))))..))))).........)).).)))))))))))))))))))).)))) (-59.40)

Length sequence

: 133

Length match:

132