chr22_13

cmsearch-Rfam

Family :

mir-328

Id:

RF00772

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00772

Description:

not description

Score:

29.4

E-value:

0.0099

From sequence:

438107

To sequence:

438189

Alignments:

                     v                   vvv                      vvv                  v                NC
                 :<<<<<-<<<<<<<<<<<<<<<<-<<<<<-<---<______>-->>>..>>>>>>>>>>>>>>>>>>>->>>>>:::::::::::: CS
  RF00772      1 UGGggcaGggGGGcaGgggGGGcUcAgGgAGAAAguaUuUacagCcC..cUggCCCcccCugCCCccCCgccCCcugUuccaaaau 84    
                 UG G :+G:GGGG::GGG:G G     GGA:   : AU  A:+G:CC  ++G C C:CCC::CCCC:C : C C      +A   U
    chr22 438107 UGCGGGGGGGGGGGGGGGGGGGGG---GGAAUGGGCAUCCAUUGUCCauAAGUCUCUCCCCCCCCCUCACACGCACACAGUACCGU 438189
                 *************99999999974...66666666666666666666323448********************************* PP

>>

RNAfold
>chr22_13
UGCGGGGGGGGGGGGGGGGGGGGGGGAAUGGGCAUCCAUUGUCCAUAAGU
CUCUCCCCCCCCCUCACACGCACACAGUACCGUA
((((...((((((((((((((((....(((((((.....)))))))...))))))))))))))))...))))............ (-51.00)

Length sequence

: 84

Length match:

81