chr22_19

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

37.2

E-value:

0.003

From sequence:

438095

To sequence:

438184

Alignments:

                                                                                NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<~~~~~~>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaG*[21]*CuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G:G:G GUGUG   G:G:G:G:: G:G      C:C ::C:C:C:C CACAC C:C:C: U
    chr22 438095 UGUGUGUGUGUGUGCGGGGGGGGGGGGG*[34]*CUCUCCCCCCCCCUCACACGCACACAGU 438184
                 ********************99999998...9..8999999********************* PP

>>

RNAfold
>chr22_19
GUGUGUGUGUGUGCGGGGGGGGGGGGGGGGGGGGGGGAAUGGGCAUCCAU
UGUCCAUAAGUCUCUCCCCCCCCCUCACACGCACACAGU
.((((((((((((.((((((((((((((.....(((.(((((....))))).))).....)))))))))))))).)))))))))))).. (-66.40)

Length sequence

: 89

Length match:

88