chr22_20

cmsearch-Rfam

Family :

mir-574

Id:

RF00929

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00929

Description:

not description

Score:

36.3

E-value:

0.0049

From sequence:

639927

To sequence:

640047

Alignments:

                   v                 v       v v                v v       v               v     NC
                 <<<<<<<<<<<<-<-<<<<<<<<<<<<<<<<<--<<~~~~~~>>-->>>>>>>>>>>>>>>>>>>>>>>>>>>>>>:: CS
  RF00929      1 cGcGGGCGuGuGAGUGuGuGuGuguGaGuGuGUGuC*[ 5]*GgUCCaCgCuCaugCaCaCaCCCaCaCGCCCgCgCu 77    
                 :G+G:G:GUG:G GUGUGUG G:G:G:G GUGUG::      ::U C C C:C:U:C CACACCC:CAC:C:C C:C+
    chr22 639927 UGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUG*[51]*CAUUC-CCCACGUACUCACACCCGCACACAC-CGCC 640047
                 ****************************99888865...*..56667.569**********************.**** PP

>>

RNAfold
>chr22_20
GUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUGAUAUACCUGUC
CAACGCCCACAGAUGAAGGUGCAAUGCCUCUCCUCGCAUUCCCCACGUAC
UCACACCCGCACACACCGCC
(((.(((((((((.(((((.(((((((((((.((((..((((....))))..)))).))))......((.(.(((((........))))))))))))))).))))).)))))))))))). (-46.50)

Length sequence

: 120

Length match:

119